Publications

   Summary: 

Authored Publications (2009-2024): 64 articles incl. 9 Book chapters

Publications acknowledging ADM (2009-2023): 150 articles + 22 PhD thesis

    Selected Publications of ADM members:    2017 - 2024

  2024

• Open-hardware solutions for light sheet microscopy specimen chambers.   

Golden A, Colombelli J, Stelzer EHK, Pampaloni F. 

bioRxiv (2024). DOI: 10.1101/2024.08.22.609188 

• Innovating in a bioimaging core through instrument development.   

Munck S, DeBo C, Cawthorne C, Colombelli J. 

Journal of Microscopy (2024). DOI: 10.1111/jmi.13312 

• Light-Sheet Applications: From Rare Cell Detection to Full Organ Analysis.  

Colombelli J, Sébastien Tosi, Maizel A, Manubens-Gil L, Swoger J. 

In: Lightsheet Fluorescence Microscopy (chapter 9). Ed:  E.G. Reynaud, P. Tomančák  (2024), Wiley‐VCH GmbH 

DOI: 10.1002/9783527803910.ch9 

• Radionuclide therapy with accumulated urease-powered nanobots reduces bladder tumor size in an orthotopic murine model.   

Simó C, Serra-Casablancas M, Hortelao AC, Di Carlo V, Guallar-Garrido S, Plaza-García S, Rabanal RM, Ramos-Cabrer P, Yagüe B, Aguado L, Bardia L, Tosi S, Gómez-Vallejo V, Martín A, Patiño T, Julián E, Colombelli J, Llop J, Sánchez S. 

Nature Nanotechnology (2024). DOI: 10.1038/s41565-023-01577-y 

  2023

• Bio-Image Informatics Index BIII: A unique database of image analysis tools and workflows for and by the bioimaging community

Zhang C, Gaignard A, Kalas M, Levet F, Delestro F, Lindblad J, Sladoje N, Plantard L, Latour A, Haase R, Martins G, Sampaio P, Scholz L, NEUBIAS taggers, Tosi S, Miura K, Colombelli J, Paul-Gilloteaux P

arXiv:2312.11256v1 (2023) https://doi.org/10.48550/arXiv.2312.11256  

• Rational optimization of a transcription factor activation domain inhibitor

Basu, S; Martínez-Cristóbal, P; Frigolé-Vivas, M; Pesarrodona, M; Lewis, M; Szulc, E; Bañuelos, CA; Sánchez-Zarzalejo, C; Bielskute, S; Zhu, JQ; Pombo-García, K; Garcia-Cabau, C; Zodi, L; Dockx, H; Smak, J; Kaur, H; Batlle, C; Mateos, B; Biesaga, M; Escobedo, A; Bardia, L; Verdaguer, X; Ruffoni, A; Mawji, NR; Wang, J; Obst, JK; Tam, T; Brun-Heath, I; Ventura, S; Meierhofer, D; García, J; Robustelli, P; Stracker, TH; Sadar, MD; Riera, A; Hnisz, D; Salvatella, X. 

Nature Structural & Molecular Biology (2023) https://doi.org/10.1038/s41594-023-01159-5 

• Disruption of mitochondrial dynamics triggers muscle inflammation through interorganellar contacts and mitochondrial DNA mislocation

Irazoki, A; Gordaliza-Alaguero, I; Frank, E; Giakoumakis, NN; Seco, J; Palacín, M; Guma, A; Sylow, L; Sebastián, D; Zorzano, A. 

Embo Reports (2023) https://doi.org/10.1038/s41467-022-35732-1 

• Neurogenesis redirects B-catenin from adherens junctions to the nucleus to promote axonal growth

Herrera A, Menendez A, Ochoa A, Bardia L, Colombelli J, Pons S. 

Development (2023) https://doi.org/10.1242/dev.201651 

• Expansion microscopy of the chick embryo neural tube to overcome molecular crowding at the centrosome-cilia.

Wilmerding A, Espana-Bonilla P,  Giakoumakis NN, Saade M. 

STAR Protocols (2023) https://doi.org/10.1016/j.xpro.2022.101997 

• The P4-ATPase Drs2 interacts with and stabilizes the multisubunit tethering complex TRAPPIII in yeast.

Pazos I, Puig-Tintó M, Betancur L, Cordero J, Jiménez-Menéndez N, Abella M, Hernández AC, Duran AG, Adachi-Fernández E, Belmonte-Mateos C, Sabido-Bozo S, Tosi S, Nezu A, Oliva B, Colombelli J, Graham TR, Yoshimori T, Muñiz M, Hamasaki M, Gallego O. 

EMBO Reports (2023) https://doi.org/10.15252/embr.202256134 

• Transient and DNA-free in vivo CRISPR/Cas9 genome editing for flexible modeling of endometrial carcinogenesis.

Navaridas R, Vidal-Sabanés M, Ruiz-Mitjana A, Perramon-Güell A, Megino-Luqye C, Llobet-Navas D, Matias-Guiu X Egea J, Encinas M, Bardia L, Colombelli J, Dolçet X. 

Cancer Comm (2023) https://doi.org/10.1002/cac2.12409 

  2022

• Metastatic recurrence in colorectal cancer arises from residual EMP1+ cells.

Cañellas-Socias A, Cortina C, Hernando-Momblona X, Palomo-Ponce S, Mulholland EJ, Turon G, Mateo L, Conti S, Roman O, Sevillano M, Slebe F, Stork D, Caballé-Mestres A, Berenguer-Llergo A, Álvarez-Varela A, Fenderico N, Novellasdemunt L, Jiménez-Garcia L, Sipka T, Bardia L, Lorden P, Colombelli J, Heyn H, Trepat X, Tejpar S, Sancho E, Tauriello DVF, Leedham S, Stephan-Otto Attolini C, Batlle E. 

Nature 611, 603-613 (2022) https://doi.org/10.1038/s41586-022-05402-9 

• Targeted immunotherapy against distinct cancer-associated fibroblasts overcomes treatment resistance in refractory HER2+ breast tumors.

Rivas EI, Linares J, Zwick M, Gómez-Llonin A, Guiu M, Labernadie A, Badia-Ramentol J, Lladó A, Bardia L, Pérez-Núñez I, Martínez-Ciarpglini C, Tarazona N, Sallent-Aragay A, Garrido M, Celiá-Terrassa T, Burgués O, Gomi RR, Albanell J, Calon A.  

Nature Comm 13, 5310 (2022) https://doi.org/10.1038/s41467-022-32782-3 

• The LEGO® brick road to open science and biotechnology.

Boulter E, Colombelli J, Henriques R, Féral C. 

Trends in Biotechnology 40(9) 1073-1087 (2022). https://doi.org/10.1016/j.tibtech.2022.02.003 

• Modeling Biochemical Gradients In Vitro to Control Cell Compartmentalization in a Microengineered 3D Model of the Intestinal Epithelium

Altay G, Abad-Lázaro A, Gualda EJ, Folch J, Insa C, Tosi S, Hernando-Momblona X, Battle E, Loza-Álvarez P, Fernández-Majada V, Martinez E. 

Advanced Healthcare Materials (2022) https://doi.org/10.1002/adhm.202201172

2021

• Control of hormone-driven organ disassembly by ECM remodeling and Yorkie-dependent apoptosis.

Fraire-Zamora JJ, Tosi S, Solon J, Casanova J. 

Current Biology 31(23) P5261-5273.E4 (2021).

• Proteostasis failure and mitochondrial dysfunction leads to aneuploidy-induced senescence.

Joy J, Barrio L, Santos-Tapia C, Rmao D, Giakoumakis NN, Clemente-Ruiz M, Milán M.

Dev. Cell 56(14) P2043-2058.E7 (2021).

• Highlights from the 2016-2020 NEUBIAS training school for Bioimage Analysts: a success story and key asset for analysts and life scientists

Martins GG, Cordelières FP, Colombelli J, D'Antuono R, Golani O, Guiet R, Haase R, Klemm AH, Louveaux M, Paul-Gilloteaux P, Tinevez JY, Miura K. 

F1000Research 2021, 10:334 (2021) doi: 10.12688/f1000research.25485.1

• Bioimage analysis workflows: community resources to navigate through a complex ecosystem

Paul-Gilloteaux P, Tosi S, Hériché JK, Gaignard A, Ménager Hervé, Marée R, Baecker V, Klemm A, Kalas M, Zhang C, Miura K, Colombelli J. 

F1000Research 2021, 10:320 (2021) 

• Ιn vivo imaging of DNA-bound minichromosome maintenance complex in embryonic mouse cortex

Mougkogianni M, Kalogeropoulou A, Giakoumakis NN, Lygerou Z, Taraviras S.

STAR Protocols 2(1): 100234 (2021)

• AutoScanJ: A Suite of ImageJ Scripts for Intelligent Microscopy.

Tosi S, Lladó A, Bardía L, Rebollo E, Godo A, Stockinger P, Colombelli J.

Front. Bioinform.  doi: 10.3389/fbinf.2021.627626 (2021).

• MosaicExplorerJ: Interactive stitching of terabyte-size tiled datasets from lightsheet microscopy [version 2; peer review: 2 approved]

Tosi S, Bardía L, Barallobre MJ, Muñoz-Barrutia A, Soto-Montenegro ML, Colombelli J.

F1000Research, 9:1308 (2021) https://doi.org/10.12688/f1000research.27112.2

   2020

• The NEUBIAS Gateway: a hub for bioimage analysis methods and materials.

Cimini BA, Nørrelykke SF, Louveaux M, Sladoje N, Paul-Gilloteaux P, Colombelli J, Miura K.

F1000Research, 9:613 (2020).

• BIAFLOWS: A Collaborative Framework to Reproducibly Deploy and Benchmark Bioimage Analysis Workflows

Rubens U, Mormont R, [...], Tosi S.

Patterns (Cell Press) 1(3): 100040. 2020.

• LOBSTER: an environment to design bioimage analysis workflows for large and complex fluorescence microscopy data

Tosi S, Bardia L, Filgueira MJ, Calon A, Colombelli J.

Bioinformatics 36(8):2634–2635. 2020.

• Imaging the Cell Morphological Response to 3D Topography and Curvature in Engineered Intestinal Tissues.

Altay G, Tosi S, García-Diaz M, Martínez E.

Front. Bioeng. Biotechnol. DOI: 10.3389/fbioe.2020.00294, 2020

• Drs2 regulates TRAPPIII in Atg9 transport: exposing the interplay of P4-ATPases and Multisubunit Tethering Complexes

Pazos I, Puig-Tintó M, Cordero J, Jiménez-Menéndez N, Abella M, Duran AG, Adachi-Fernández E, Belmonte-Mateos C, Sabido-Bozo S, Hernández AC, Tosi S, Nezu A, Colombelli J, Graham TR, Yoshimori T, Muñoz M, Hamasaki M, Gallego O.

BioRxiv. DOI: 10.1101/2020.12.25.417865 , 2020

• From whole-organ imaging to in-silico blood flow modeling: A new multi-scale network analysis for revisiting tissue functional anatomy

Kennel P, Dichamp J, Barreau C, Guissard C, Teyssedre L, Rouquette J, Colombelli J, Lorsignol A, Casteilla L, Plouraboué F.

Plos Comput Biol, 16 (2), e1007322 (2020)

   2019

• Migrating cells 3D tracking from live microscopy time-lapses

in: Computer Optimized Microscopy Methods and Protocols (ed: Rebollo E. and Bosch M), Springer, 2019.

Tosi S, Campbell K.

Methods in Molecular Biology 2040. 2019.

• Sidekick is a key component of tricellular adherens junctions that acts to resolve cell rearrangements.

Letizia AL, He D, Astigarraga S, Colombelli J, Hatini V, Llimargas M, Treisman JE.

Dev Cell 50(3):313-326.e5. (2019).

• Self-organized intestinal epithelial monolayers in crypt and villus-like domains show effective barrier function.

Altay G, Larrañaga E, Tosi S, Barriga FM, Batlle E, Fernández-Majada V, Martinez E

Scientific Reports, 9: 10140 (2019)

• Reversible silencing of endogenous receptors in intact brain tissue using 2-photon pharmacology

Pittolo S, Lee H, Lladó A, Tosi S, Bosch M, Bardia L, Gómez-Santacana X, Llebaria A, Soriano E, Colombelli J, Poskanzer KE, Perea G and Gorostiza P.

Proc Natl Acad Sci U S A, (2019)

• Autophagy-induced senescence is regulated by p38α signaling

Slobodnyuk K, Radic N, Ivanova S, Lladó A, Trempolec N, Zorzano A and Nebreda AR.

Cell Death Dis, 10 (6), 376 (2019)

• Regional vulnerability and spreading of hyperphosphorylated tau in seeded mouse brain

Detrez JR, Maurin H, Van Kolen K, Willems R, Colombelli J, Lechat B, Roucourt B, Van Leuven F, Baatout S, Larsen P, Nuydens R, Timmermans JP and De Vos WH.

Neurobiol Dis, (2019)

• Self-Sensing Enzyme-Powered Micromotors Equipped with pH-Responsive DNA Nanoswitches

Patino T, Porchetta A, Jannasch A, Lladó A, Stumpp T, Schaeffer E, Ricci F, Sánchez S.

Nanoletters, epub feb 1, 2019.

   2018

• Morphogenetic movements affect local tissue organisation during embryonic Drosophila morphogenesis.

Letizia A, Tosi S, Llimargas M.

Eur J Cell Biol 97 (4): 243-256. (2018)

• Adherens Junction Length during Tissue Contraction Is Controlled by the Mechanosensitive Activity of Actomyosin and Junctional Recycling.

Sumi A, Hayes P, D'Angelo A, Colombelli J, Salbreux G, Dierkes K, Solon J. 

Dev Cell 47 453- (2018)

• Toward quantitative three-dimensional microvascular networks segmentation with multiview light-sheet fluorescence microscopy

Kennel P, Teyssedre L, Colombelli J and Plouraboué F.

J Biomed Opt, 23 (8), 1-14 (2018)

• 3D imaging of cleared human skin biopsies using light-sheet microscopy: A new way to visualize in-depth skin structure

Abadie S, Jardet C, Colombelli J, Chaput B, David A, Grolleau JL, Bedos P, Lobjois V, Descargues P and Rouquette J.

Skin Res Technol, 24 (2), 294-303 (2018)

   2017

• The dynamic assembly of distinct RNA polymerase I complexes modulates rDNA transcription

Torreira E, Alegrio Louro J, Pazos I, González-Polo N, Gil-Carton D, Garcia Duran A, Tosi S, Gallego O, Calvo O.

eLife 2017;6: e20832

• A genome editing approach to study cancer stem cells in human tumors.

Cortina C, Turon G, Stork D, Hernando-Momblona X, Sevillano M, Aguilera M, Tosi S, Merlos-Suárez A, Stephan-Otto Attolini C, Sancho E, Battle E.

EMBO Mol Med 9(7): 869-879 (2017)

• Super-Resolution Microscopy Unveils Dynamic Heterogeneities in Nanoparticle Protein Corona.

Feiner-Garcia N, Beck M, Pujals S, Tosi S, Mandal T, Buske C, Linden M, Albertazzi L.

Small, 13 (41) (2017)

• Differential requirements for Tousled-like kinases 1 and 2 in mammalian development

Segura-Bayona S, Knobel PA, González-Burón H, Youssef SA, Peña-Blanco A, Coyaud É, López-Rovira T, Rein K, Palenzuela L, Colombelli J, Forrow S, Raught B, Groth A, de Bruin A and Stracker TH.

Cell Death Differ, 24 (11), 1872-1885 (2017)

• Tetraspanin 6: a pivotal protein of the multiple vesicular body determining exosome release and lysosomal degradation of amyloid precursor protein fragments

Guix FX, Sannerud R, Berditchevski F, Arranz AM, Horré K, Snellinx A, Thathiah A, Saido T, Saito T, Rajesh S, Overduin M, Kumar-Singh S, Radaelli E, Corthout N, Colombelli J, Tosi S, Munck S, Salas IH, Annaert W and De Strooper B.

Mol Neurodegener, 12 (1), 25 (2017)

• Polarized cortical tension drives zebrafish epiboly movements

Hernández-Vega A, Marsal M, Pouille PA, Tosi S, Colombelli J, Luque T, Navajas D, Pagonabarraga I and Martín-Blanco E.

Embo J, 36 (1), 25-41 (2017)

• Epilogue: A Framework for Bioimage Analysis.

In: Standard and Super-Resolution Bioimaging Data Analysis: A Primer (editors: Wheeler A. Henriques R.).

Kota M, Tosi S.

Wiley ISBN: 978-1-119-09690-0, 2017.

   Selected Publications of ADM members:    2009 - 2016

   2016

• Developing Epithelia: What the Eye Cannot Grasp

Tosi S and Milán M.

Dev Cell, 36 (1), 7-8 (2016)

• Patterned Contractile Forces Promote Epidermal Spreading and Regulate Segment Positioning during Drosophila Head Involution

Czerniak ND, Dierkes K, D’Angelo A, Colombelli J, Solon J.

Current Biology 26 (14), 1895-1901 (2016)

Book chapters:

• Microscòpia òptica avançada per a les ciències de la vida: de les seccions òptiques a la nanodissecció òptica. 

Bardia L, Marsal M, Colombelli J.

Treballs de la Societat Catalana de Biologia, 66:19-24 (2016) 

Book chapters:

• Introduction: What is Bioimage Analysis ? Miura K, Tosi S

• Tumor Blood vessels_ 3D Tubular Network Analysis. Tischer C, Tosi S 

• Quantitative Evaluation of Multicellular Movements in Drosophila Embryo. Paul-Gilloteaux P, Tosi S

• FISH Spot Detection in Human Spermatozoids. Schulze U, Tosi S 

• Bioimage Analysis Tools. Miura K, Tosi S, Moehl C, Zhang C, Paul-Gilloteaux P, Schulze U, Norrelykke SF, Tischer C, Pengo T 

In: Bioimage Data Analysis (Ed: Kota Miura), ePub ISBN:978-3-527-80094-0. Wiley-VCH

 2015

• Loss of GPR3 reduces the amyloid plaque burden and improves memory in Alzheimer's disease mouse models

Huang Y, Skwarek-Maruszewska A, Horré K, Vandewyer E, Wolfs L, Snellinx A, Saito T, Radaelli E, Corthout N, Colombelli J, Lo AC, Van Aerschot L, Callaerts-Vegh Z, Trabzuni D, Bossers K, Verhaagen J, Ryten M, Munck S, D'Hooge R, Swaab DF, Hardy J, Saido TC, De Strooper B and Thathiah A.

Sci Transl Med, 7 (309), 309ra164 (2015)

• Mitotic cell rounding and epithelial thinning regulate lumen growth and shape

Hoijman E, Rubbini D, Colombelli J and Alsina B.

Nat Commun, 6 7355 (2015)

• Decrease in Cell Volume Generates Contractile Forces Driving Dorsal Closure

Saias L, Swoger J, D'Angelo A, Hayes P, Colombelli J, Sharpe J, Salbreux G and Solon J.

Dev Cell, 33 (5), 611-21 (2015)

• Stromal gene expression defines poor-prognosis subtypes in colorectal cancer

Calon A, Lonardo E, Berenguer-Llergo A, Espinet E, Hernando-Momblona X, Iglesias M, Sevillano M, Palomo-Ponce S, Tauriello DV, Byrom D, Cortina C, Morral C, Barceló C, Tosi S, Riera A, Attolini CS, Rossell D, Sancho E and Batlle E.

Nat Genet, 47 (4), 320-329 (2015)

    2014

• Converging axons collectively initiate and maintain synaptic selectivity in a constantly remodeling sensory organ

Pujol-Martí J, Faucherre A, Aziz-Bose R, Asgharsharghi A, Colombelli J, Trapani JG and López-Schier H.

Curr Biol, 24 (24), 2968-74 (2014)

• Forces driving epithelial wound healing

Brugues A, Anon E, Conte V, Veldhuis JH, Gupta M, Colombelli J, Munoz JJ, Brodland GW, Ladoux, B, and Trepat X

Nat Phys, 10 (9), 683–690 (2014)

Book Chapter:

• Lightsheet Fluorescence Microscopy Applications for Multicellular Systems

Colombelli J, Lorenzo C

In: "Super resolution and other novel Techniques", Edited by: Anda Cornea and P. Michael Conn. 109-120 (2014). ISBN: 978-0-12-409513-7, Elsevier.

    2013

• Light-regulated stapled peptides to inhibit protein-protein interactions involved in clathrin-mediated endocytosis

Nevola L, Martín-Quirós A, Eckelt K, Camarero N, Tosi S, Llobet A, Giralt E and Gorostiza P.

Angew Chem Int Edit, 52 (30), 7704-8 (2013)

• Fabrication of hierarchical micro-nanotopographies for cell attachment studies

López-Bosque MJ, Tejeda-Montes E, Cazorla M, Linacero J, Atienza Y, Smith KH, Lladó A, Colombelli J, Engel E and Mata A.

Nanotechnology, 24 (25), 255305 (2013)

• Force communication in multicellular tissues addressed by laser nanosurgery

Colombelli J and Solon J.

Cell Tissue Res, 352 (1), 133-47 (2013)

    2012

• Reprogramming cell shape with laser nano-patterning

Vignaud, T, Galland, R., Tseng, Q, Blanchoin, L, Colombelli, J, Théry, M. J Cell Sci jcs.104901;

Advance Online Publication February 22, 2012, doi:10.1242/jcs.104901

    2011

• Viscoelastic response of contractile filaments bundles

Besser, J, Colombelli, J, Stelzer, EHK, Schwarz, U.  

Phys. Rev. E 83: 051902 (2011).

• Rac1 and Calmodulin Interactions Modulate Dynamics of ARF-6Dependent Endocytosis

Vidal-Quadras M, Gelabert-Baldrich M, Soriano-Castell D, Lladó A, Rentero C, Calvo M, Pol A, Enrich C, Tebar F.   

Traffic (2011) .https://doi.org/10.1111/j.1600-0854.2011.01274.x

• Dynamic recruitment of licensing factor Cdt1 to sites of DNA damage

Roukos V, Kinkhabwala A, Colombelli J, Kotsantis P, Taraviras S, Nishitani H, Stelzer EHK, Bastiaens P, Lygerou Z.

J Cell Sci, 124, 422-434 (2011)

• A novel laser nanosurgery approach supports de novo Golgi biogenesis in mammalian cells

Taengemo C, Ronchi P, Colombelli J, Haselman U, Antony C, Stelzer EHK, Pepperkok R, Reynaud EG.

J Cell Sci, 124, 978-987 (2011)

    2009

• A macrodomain-containing histone rearranges chromatin upon sensing PARP1 activation

Timinszky G, Till S, Hassa PO, Hothorn M, Kustatscher G, Nijmeijer B, Colombelli J, Altmeyer M, Stelzer EH, Scheffzek K, Hottiger MO, Ladurner AG.

Nat Struct Mol Biol, 16 (9), 923-929 (2009)

• Pulsed forces timed by a ratchet-like mechanism drive directed tissue movement during dorsal closure

Solon J, Kaya-Copur A, Colombelli J, Brunner D.

Cell, 137 (7), 1331-1342 (2009)

• Mechanosensing in actin stress fibers revealed by a close correlation between force and protein localization

Colombelli J, Besser A, Kress H, Reynaud EG, Girard P, Caussinus E, Haselmann U, Small JV, Schwarz US, Stelzer EH.

J Cell Sci, 122 (Pt 10), 1665-1679 (2009)

   Publications that acknowledge ADM: 2009-2024

2024

Polsani N., et al. Development (2024) DOI: 10.1242/dev.202596

Rojas ML., et al. FEBS Journal (2024) DOI:10.1111/febs.16979 

2023

Ortega-Gascó A., et al. Cerebral Cortex (2023) DOI: 10.1093/cercor/bhad340 

Barbosa BMG., et al. Angewandte Chemie (2023) DOI: 10.1002/anie.202316730

Naón D. et al. Science (2023) DOI: 10.1126/science.adh9351

Solá P., et al. Nature Aging (2023) DOI: 10.1038/s43587-023-00431-z 

Garcia-Cabau, C. et al. bioRxiv (2023) DOI: 10.1101/2023.03.19.532587 

Barrio L, et al. Current Biol (2023) DOI: 10.1016/j.cub.2023.09.004

Irazoki A., et al. Nature Comm (2023) DOI: 10.1038/s41467-022-35732-1 

Sanfeliu-Cerdán, N., et al. Nature Cell Biol. (2023) DOI: 10.1038/s41556-023-01247-0 

De Giorgio E., et al. PLOS Biology (2023) DOI: 10.1371/journal.pbio.3001978

Polsani N., et al. bioRxiv (2023) DOI: 10.1101/2023.12.05.570300

Gonzalez L, et al. iScience (2023) DOI: 10.1016/j.isci.2023.106202

Rojas ML., et al. FEBS J (2023) DOI: 10.1111/febs.16979

Ali A., et al. Nature Comm. (2023) DOI: 10.1038/s41467-023-35955-w

Tsukita K, et al. Science Advances (2023) DOI: 10.1126/sciadv.adf6358

Pino-Jiménez B, et al. Autophagy (2023) DOI: 10.1080/15548627.2023.2231828

Llorente A., et al. Nature Cell Biology (2023) DOI: 10.1038/s41556-023-01281-y 

Pazos I., et al. EMBO Reports (2023) DOI: 10.15252/embr.202256134

Sabaté-Pérez A., et al. Autophagy (2023) DOI: 10.1080/15548627.2022.2111081

2022

Garcia-Latorre, E. et al. Nature Comm (2022) DOI: 10.1038/s41467-022-32400-2

Basu S., et al. bioRxiv (2022) DOI: 10.1101/2022.08.18.504385

Duran-Arqué B., et al. Genome Biol (2022) DOI: 10.1186/s13059-022-02759-y 

Álvarez-Varela A., et al. Nature Cancer (2022) DOI: 10.1038/s43018-022-00402-0 

Peussa H., et al. PLOS One (2022) DOI: 10.1371/journal.pone.0268570

Sanfeliu-Cerdán, N. et al. bioRxiv (2022) DOI: 10.1101/2022.07.08.499356

Basei FL, et al. FEBS J (2022) DOI: 10.1111/febs.16343

Casanellas, I et al. Nanomedicine (2022) DOI: 10.2217/nnm-2021-0399

Sabaté-Pérez A, et al. Autophagy (2022) DOI: 10.1080/15548627.2022.2111081 

Dan Y, et al. BioRxiv (2022) https://doi.org/10.1101/2022.09.09.507259 

Bernués J, et al. Nucleic Acids Res. (2022) doi: 10.1093/nar/gkac716 

Freitas F & Attwell D. eLife (2022)  doi: 10.7554/eLife.74211

Fadjukov J, et al. J Gen Physiol (2022) doi: 10.1085/jgp.202112916 

Pellegrini P, et al. Mol Neurobiol (2022) doi: 10.1007/s12035-021-02682-6 

Lujan P, et al. BioRxiv (2022) doi: 10.1101/2022.04.20.488883  

2021

Hevia CF, et al. BioRxiv (2021) doi: 10.1101/2021.05.31.445806 

Buitrago D, et al. Nat Comm (2021) doi: 10.1038/s41467-021-23142-8 

Bernués J, et al. BioRxiv (2021) doi: 10.1101/2021.06.22.449135 

Varea O, et al. Neurobio Dis. (2021) doi: 10.1016/j.nbd.2020.105173 

Gava F, et al. Cancers (2021) https://doi.org/10.3390/cancers13071490 

Kakimoto PA, et al. Redox Biol. (2021) https://doi.org/10.1016/j.redox.2021.102026 

Yano T, et al. EMBO J. (2021) https://doi.org/10.15252/embj.2020104712 

Marsal M, et al. Front Cell Dev Biol. (2021)  doi: 10.3389/fcell.2021.697097 

Beasley AE, et al. Biosystems (2021) doi.org/10.1016/j.biosystems.2021.104507 

Viais R, et al. eLife (2021) doi: 10.7554/eLife.67989

Bielskuté S, et al. Protein Sci. (2021) doi: 10.1002/pro.4110

Romao D, et al. Current Biol. (2021) doi: 10.1016/j.cub.2021.01.080 

Miura K & Noerrelykke S, EMBO J (2021) doi: 10.15252/embj.2020105889 

2020

Torras-Llort M, et al. Commun Biol (2020). doi: 10.1038/s42003-020-01182-y 

Ricolo D, et al. eLife (2020), doi: 10.7554/eLife.61111 

Camarero N, et al. Chemical Science (2020), doi: 10.1039/D0SC03820B.

Rossi D, et al. Prog Neurobiol (2020) doi: 10.1016/j.pneurobio.2019.101743.

Kakimoto PA, et al. Biorxiv (2020) doi: 10.1101/2020.06.10.144808.

Pascual R, et al. Sci Adv (2020) doi: 10.1126/sciadv.aax3868.

Di Mauro G, et al. Biochim Biophys Acta Gene Regul Mech (2020)  doi: 10.1016/j.bbagrm.2020.194492.

Morral C, et al. Cell Stem Cell (2020) doi: 10.1016/j.stem.2020.04.012.

Serra-Bardenys G, et al. Biorxiv (2020) doi: 10.1101/2020.01.30.927038.

Parcerisas A, et al. Cerebral Cortex (2020) doi: 10.1093/cercor/bhz342.  

Roselló-Busquets, et al. Front. Mol. Neurosci (2020) doi: 10.3389/fnmol.2020.00056. 

Santin Y, et al- Cell Death Differ (2020) doi: 10.1038/s41418-019-0470-y

2019

Lalioti ME, et al.  Glia (2019) doi: 10.1002/glia.23690.

Woloszyk, A, et al.  Sci Reports (2019) dopi: 10.1038/s41598-019-55411-4.

Murcia L, et al. Cell Rep (2019) doi: 10.1016/j.celrep.2019.06.004.

Terrazas M, et al. Chem Commun (2019) doi: 10.1039/c8cc08823c.

Cabré G, et al. Nat Commun (2019) doi: 10.1038/s41467-019-08796-9.

Garreta E, et al. Nat Materials (2019) doi: 10.1038/s41563-019-0287-6.

Batlle R, et al. Nat Commun (2019) doi: 10.1038/s41467-019-10946-y.

Cano-Crespo S, et al.  Sci. rep (2019) doi: 10.1038/s41598-019-50547-9.

Fuster C, et al. J Pep Sci (2019) doi: 10.1002/psc.3172.

Hernández-Alvarez MI, et al. Cell (2019) doi: 10.1016/j.cell.2019.04.010.

Tao H, et al. Nat Commun (2019) doi: 10.1038/s41467-019-09540-z.

Ivanova S, et al.  EMBO J (2019) doi: 10.15252/embj.201899300.

Patino T. et al. Nanoletters (2019) doi: 10.1021/acs.nanolett.8b04794 

2018

Ros O, et al. PLoS Genet (2018) doi: 10.1371/journal.pgen.1007432.

Öztürk-Çolak A, et al. GENETICS (2018) doi: 10.1534/genetics.118.301444.

Eftekharzadeh B, et al. Nat Commun (2018) doi: 10.1038/s41467-019-12578-8.    

Tauriello DVF, et al. Nature (2018) doi: 10.1038/nature25492.

Casanellas, et al. JoVE (2018) doi: 10.3791/56347.    

Lee SB, et al. Science Advances (2018) doi: DOI: 10.1126/sciadv.aat4985.

Silva J, et al. Nat Cell Biol (2018) doi: 10.1038/s41556-017-0016-9.    

Gawrzak S, et al.  Nat Cell Biol (2018) doi: 10.1038/s41556-017-0021-z.    

Eibes S, et al. Current Biol (2018) doi: 10.1016/j.cub.2017.11.046.

Del Barco I, et al. Stem Cells Reports (2018) doi: 10.1016/j.stemcr.2017.11.021.

Xuan M, et al. Angewandte Chemie Int Ed (2018) doi: 10.1002/anie.201801910.

Augé E, et al. Sci Rep (2018) 10.1038/s41598-018-31766-y.

Espino Guarch M, et al. eLife (2018) doi: 10.7554/eLife.31511.    

Sulistomo HW, et al. J Biol Chem (2018) doi: 10.1074/jbc.RA118.005471.

Solanas G, et al. Cell (2018) doi: 10.1016/j.cell.2017.07.035.

Miret-Casals L, Cell Chem Biol (2018) 10.1016/j.chembiol.2017.12.001.    

Rodríguez-Nuevo A, et al. EMBO J (2018) 10.15252/embj.201796553.

Mestre R, et al. Advanced Materials Technologies (2018) doi: 10.1002/admt.201800631.

Aguilar JP, et al. Advanced Functional Materials (2018) doi: 10.1002/adfm.201703014.

Dumbović G, et al. Nucleic Acids Research (2018) doi: 10.1093/nar/gky263.

Matamoros-Angles A, et al. Mol. Neurobiol. (2018) doi: 10.1007/s12035-017-0506-6.

Latorre E, et al. Nature (2018) doi: 10.1038/s41586-018-0671-4 

2017

Elosegui-Artola A, et al. Cell (2017) doi: 10.1016/j.cell.2017.10.008 

Terriente-Félix A, et al. Dis Model Mech. (2017) doi: 10.1242/dmm.028118.

Recasens-Alvarez C, et al. Nat Commun (2017) doi: 10.1038/ncomms13815.

Maillo C, et al. Nat Cell Biol  (2017) doi: 10.1038/ncb3461.

Solerab H, et al. Neurobiol of aging (2017) doi: 10.1016/j.neurobiolaging.2016.09.006.    

Barriga FM, et al. Cell Stem Cell (2017) doi: 10.1016/j.stem.2017.02.007.

Marsal M, et al. Cell Cycle (2017) doi: 10.1080/15384101.2017.1327489.

Trempolec N, et al. Sci Rep (2017) doi: 10.1038/s41598-017-11309-7.    

Salzer MC, et al. Cell (2017) doi: 10.1016/j.cell.2018.10.012.

Wen J, et al. Biophysical Journal (2017) doi: 10.1016/j.bpj.2017.04.024.

Perkel JM. Nature (2017) doi: 10.1038/545119a.    

Salazar K, et al. J Neurochemistry (2017) doi: 10.1111/jnc.12793.

2016

Mikolcevic P, et al. Nat Commun (2016) 10.1038/ncomms11084.    

Barrecheguren PJ, Dev Neurobiology (2016) doi: 10.1002/dneu.22481.

Slebe F, et al. Nat Commun (2016) doi: 10.1038/ncomms11199.    

Mateo F, et al. Oncogene (2016) doi: 10.1038/onc.2016.427.    

Vilches S, et al. Mol Neurobiol (2016) doi: 10.1007/s12035-015-9360-6.

Sánchez-Huertas C, et al. Nat Commun (2016) doi: 10.1038/ncomms12187.

Le Roux AL, et al. Chemistry Select (2016) doi: 10.1002/slct.201600117 

2015

Santacatterina F, et al. J Translational Med   doi: 10.1186/s12967-015-0424-1

Blanch M, et al. Royal Society Open Science (2015) doi: 10.1098/rsos.150011.    

Ros O, et al. J Neurosci (2015) doi: 10.1523/JNEUROSCI.0124-14.2015.

Zamudio-Vázquez R, et al. Chem. Sci. (2015) 10.1039/C5SC00125K.

Campbell K, Casanova J. Nat Commun (2015) 10.1038/ncomms8998.

Giangarrà V, et al. PLOS one  (2015) doi: 10.1371/journal.pone.0138794.

Jung P, et al.  Stem Cell Reports (2015) doi:10.1016/j.stemcr.2015.10.003.

Álvarez-Fernández C, Plos Genetics (2015) doi: 10.1371/journal.pgen.1004965.

2014

Saez I, et al. J Cerebral Blood Flow & Metabolism   (2014) https://doi.org/10.1038/jcbfm.2014.33 

Lecland & Lueders, Nat Cell Biol. (2014) doi: 10.1038/ncb2996.

Rebollo E, et al. Methods (2014) doi: 10.1016/j.ymeth.2014.04.021.

Sinadinos C, et al. Aging Cell (2014) https://doi.org/10.1111/acel.12254

Sala D, et al. J Clin Invest (2014) doi: 10.1172/JCI72327.

Moreno, et al. J Controlled Release (2014) doi: 10.1016/j.jconrel.2014.03.005.

2013

Felice-Alessio Bava FA, et al. Nature. (2013) doi: 10.1038/nature11901

Segalés J et al. Am J Physiology (2013) doi: 10.1152/ajpendo.00546.2012

Januschke J, et al. Nat Cell Biol (2013) doi: 10.1038/ncb2671 

Piñeyro D, et al. Biochim. Biophys. Acta- Gene Reg. Mech. 10.1016/j.bbagrm.2013.07.002 

Brissos R, et al. New Journal of Chemistry (2013) doi: 10.1039/C3NJ41125G 

2012

Mauvezin C et al. FEBS Letters (2012). doi: 10.1016/j.febslet.2012.06.032

Sancho A et al. Plos One (2012) doi: 10.1371/journal.pone.0034034

Duran J, et al. EMBO Mol Med (2012) doi:10.1002/emmm.201200241

Sdelci S, et al. Curr Biol (2012) doi: 10.1016/j.cub.2012.06.027

Rubio S, et al. FASEB J (2012) doi: 10.1096/fj.12-208413

2011

Solanas G, et al. Nat Cell Biol. (201) doi: 10.1038/ncb2298.

Valles-Ortega et al. EMBO Mol Med (2011) doi: 10.1002/emmm.201100174

Januschke J, et al. Nat Commun (2011) doi: 10.1038/ncomms1245

Diaz A, et al. J Biol Chem (2011) doi: 10.1074/jbc.M111.236109

Campbell K, et al. Dev Cell (2011) doi: 10.1016/j.devcel.2011.10.005

Izquierdo-Useros N, et al. Traffic (2011) doi: 10.1111/j.1600-0854.2011.01281.x

Urban P, et al. J Controlled Release (2011) doi: 10.1016/j.jconrel.2011.01.001

Regué L, et al. J Biol Chem (2011) doi: 10.1074/jbc.M110.209080

Bertran MT, et al. EMBO J (2011) doi: 10.1038/emboj.2011.179

Rubio S, et al. Eur J of Neurosci (2011) doi: 10.1111/j.1460-9568.2011.07906.x

Reverter M, et al. Mol. Biol. Cell (2010) doi: 10.1091/mbc.E11-04-0332 

2010

Gervais L & Casanova J, Curr Biol (2010) doi: 10.1016/j.cub.2009.12.043 

Sorrosal G, et al. EMBO Rep (2010)  https://doi.org/10.1038/embor.2010.43 

2009

Mauvezin C et al. EMBO Rep (2009) doi: 10.1038/embor.2009.242

Mansilla S, et al. Biochemical Pharmacology (2009) 10.1016/j.bcp.2009.03.027 

2008

Liesa M et al. Plos One (2008) doi: doi.org/10.1371/journal.pone.0003613 

Selected publications of ADM members, prior to 2008

    2008

A correlative light and electron microscopy method based on laser micropatterning and etching

Colombelli J, Tängemo C, Haselman U, Antony C, Stelzer EHK, Pepperkok R, Reynaud EG.

Methods Mol Biol., 457 (3), 13 (2008)

Tip-cell migration controls stalk-cell intercalation during Drosophila tracheal tube elongation

Caussinus E, Colombelli J, Affolter M.

Curr Biol., 18 (22), 1727-1734 (2008)

Mechanism of phototaxis in marine zooplankton

Jékely G, Colombelli J, Hausen H, Guy K, Stelzer E, Nédélec F, Arendt D.

Nature, 456 (7220), 395-399 (2008)

The SpoMBe pathway drives membrane bending necessary for cytokinesis and spore formation in yeast meiosis

Maier P, Rathfelder N, Maeder CI, Colombelli J, Stelzer EH, Knop M.

EMBO J., 27 (18), 2363-2374 (2008)

    2007

Investigating relaxation processes in cells and developing organisms: from cell ablation to cytoskeleton nanosurgery

Colombelli J, Reynaud EG, Stelzer EH.

Methods Cell Biol., 82, 267-291 (2007)

Three-dimensional laser microsurgery in light-sheet based microscopy (SPIM)

Engelbrecht CJ, Greger K, Reynaud EG, Krzic U, Colombelli J, Stelzer EH.

Opt Express, 15 (10), 6420-6430 (2007)

    2006 

Dynein-mediated pulling forces drive rapid mitotic spindle elongation in Ustilago maydis

Fink G, Schuchardt I, Colombelli J, Stelzer E, Steinberg G.

EMBO J, 25 (20), 4897-4907 (2006)

Laser nanosurgery in cell biology

Colombelli J, Pepperkok R, Stelzer EH, Reynaud EG.

Med Sci (Paris), 22 (6-7), 651-658 (2006)

    2005

Spore number control and breeding in Saccharomyces cerevisiae: a key role for a self-organizing system

Taxis C, Keller P, Kavagiou Z, Jensen LJ, Colombelli J, Bork P, Stelzer EH, Knop M.

J Cell Biol., 171 (4), 627-640 (2005)

In vivo selective cytoskeleton dynamics quantification in interphase cells induced by pulsed ultraviolet laser nanosurgery

Colombelli J, Reynaud EG, Rietdorf J, Pepperkok R, Stelzer EH.

Traffic, 6 (12), 1093-1102 (2005)

Subcellular nanorsurgery with a pulsed subnanosecond UV-A laser

Colombelli J, Reynaud EG, Stelzer EHK.

Med Laser Appl., 20 (2005)

    2004

Ultraviolet diffraction limited nanosuregery of live biological tissues

Colombelli, J, Grill, S, Stelzer EHK.

Rev. Sci. Instr., 75 (2), 472-478 (2004)

Short-term effects and teratogenicity of heptanol on embryos of Xenopus laevis 

Olmedo E, Bardia L, Domingo J

Environ Toxicol Pharmacol  15 (2-3) 119-123 (2004)